Contigs
Blast output
./blastx -num_threads 16 -out /Users/admin/Dropbox/Cluster/BLAST/output/HardClam_swissprot_node2_blastout -db /CLC_blastdatabases/swissprot -query /Users/admin/Dropbox/Cluster/BLAST/query/HardClam_contigs.fa -outfmt 6 -evalue 1 -max_target_seqs 1
4465 hits
./blastx -num_threads 16 -out /Users/admin/Dropbox/Cluster/BLAST/output/HardClam_swissprot_node2_blastout_e10 -db /CLC_blastdatabases/swissprot -query /Users/admin/Dropbox/Cluster/BLAST/query/HardClam_contigs.fa -outfmt 6 -evalue 10 -max_target_seqs 1
7765 hits
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DESeq
RAD
